Deck 12: DNA Organization in Chromosomes

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Question
This figure represents supercoiled,circular,double- stranded DNA: <strong>This figure represents supercoiled,circular,double- stranded DNA:   If this molecule of DNA originated as a linear molecule with a linking number L of 30,which was then circular unwound,the L for the unwound circular molecule would be_________ .</strong> A)28 B)30 C)18 D)20 E)32 <div style=padding-top: 35px> If this molecule of DNA originated as a linear molecule with a linking number L of 30,which was then circular unwound,the L for the unwound circular molecule would be_________ .

A)28
B)30
C)18
D)20
E)32
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Question
In which of the following ways do polytene chromosomes differ from other chromosomes?

A)Polytene chromosomes represent uncoiled versions of meiotic chromosomes.
B)Polytene chromosomes are multiple copies of identical single- stranded DNA.
C)Polytene chromosomes can only be found in bacteria.
D)Polytene chromosomes are separated but not replicated.
E)Polytene chromosomes are replicated but not separated.
Question
Viral chromosomes exist in a variety of conformations and can be made up of _________

A)RNA only
B)DNA only
C)protein- or lipid- coding sequences
D)DNA or RNA
E)DNA,RNA,or protein
Question
Chromatin of eukaryotes is organized into repeating interactions with protein octamers called nucleosomes.Nucleosomes are composed of which class of molecules?

A)histones
B)H1 histones
C)glycoproteins
D)lipids
E)nonhistone chromosomal proteins
Question
If relaxed circular DNA is designated R ,supercoiled circular DNA is designated S) and linear DNA is designated L ,arrange these conformations in order of increasing rate of sedimentation during centrifugation.

A)L ,S ,R
B)S ,L ,R
C)S ,R ,L
D)R ,S ,L
E)L),R),S)
Question
In human chromosomes,satellite DNA sequences of about 170 base pairs in length are present in tandem arrays of up to 1 million base pairs.Found mainly in centromere regions,these DNA sequences are called .

A)alphoid families
B)telomeres
C)euchromatic regions
D)primers
E)telomere- associated sequences
Question
The condition that some organisms contain much larger amounts of DNA than are apparently "needed" and that some relatively closely related organisms may have vastly different amounts of DNA is more typical in _________.

A)eukaryotes than in prokaryotes
B)RNA viruses than in DNA viruses
C)the alphoid rather than the diploid family
D)prokaryotes than in eukaryotes
E)viruses than in bacteria
Question
Eukaryotic chromosomes contain two general domains that relate to the degree of condensation.These two regions are_________ .

A)uniform in the genetic information they contain
B)separated by large stretches of repetitive DNA
C)called heterochromatin and euchromatin
D)void of introns
E)each void of typical protein- coding sequences of DNA
Question
How was it experimentally determined that "puffs" are transcriptionally active?
Question
Chromosomal regions that represent evolutionary vestiges of duplicated copies of genes that have underdone sufficient mutations to render them untranscribable are called_________ .

A)satellites
B)alleles
C)pseudogenes
D)LINEs
E)transposons
Question
Type I topoisomerases differ from type II topoisomerases in that the type I enzymes_________ .

A)induce negative supercoiling
B)cleave both strands of a double helix
C)cleave one strand of a double helix
D)decrease the linking number L of a double helix
E)ligate fragments of DNA that have been hydrolyzed
Question
In E.coli,the genetic material is composed of _________.

A)RNA and protein
B)circular,double- stranded DNA
C)circular,double- stranded RNA
D)polypeptide chains
E)linear,double- stranded DNA
Question
Describe the chromosomal conformations of ΠX174 and polyomaviruses.
Question
Explain how linear DNA can be supercoiled.
Question
In addition to highly repetitive and unique DNA sequences,a third category of DNA sequences exists.What is it called,and what types of elements are involved in it?

A)multiple gene family DNA; hemoglobin and 5.0S RNA
B)permissive DNA; centromeres and heterochromatin
C)dominant DNA; euchromatin and heterochromatin
D)composite DNA; telomeres and heterochromatin
E)moderately repetitive DNA; SINEs,LINEs,and VNTRs
Question
What is the relationship between topoisomers?
Question
Which statement about lampbrush chromosomes is incorrect?

A)More DNA is looped out from the axis than is required for a single gene.
B)They are meiotic chromosomes.
C)Looped out regions are active in RNA synthesis.
D)The loops consist of two DNA helices,whereas the axis consists of a single DNA helix.
E)Instead of being condensed,they are extended.
Question
A particular variant of the lambda bacteriophage has a DNA double- stranded genome of 51,365 base pairs.How long would this DNA be?
Question
List several configurations that characterize different viral chromosomes.
Question
The condensed areas in polytene and lampbrush chromosomes are referred to as_________ .

A)centromeres
B)chiasmata
C)chromomeres
D)chromatids
E)puffs
Question
How do VNTRs relate to DNA fingerprinting?
Question
What are histones,and how are they arranged in nucleosomes?
Question
Describe the basic structure of a nucleosome.What is the role of histone H1?
Question
How does a polytene chromosome differ from a typical eukaryotic chromosome?
Question
Approximately how much of the mammalian genome is composed of repetitive DNA?
Question
Compare and contrast the chromosome structure of viruses,bacteria,and eukaryotes.
Question
In instances in the eukaryotic genome,DNA sequences represent evolutionary vestiges of duplicated copies of genes.What are such regions called and what are their characteristics?
Question
What is meant by SINE in terms of chromosome structure? By LINE? Why are they called "repetitive"?
Question
What are minisatellites and microsatellites?
Question
Briefly state what is meant by repetitive DNA.
Question
What is unusual about the amino acid composition of histones? How is the function of histones related to the amino acid composition? Of which histones are nucleosomes composed?
Question
List the components of a nucleosome.
Question
What similarities do bacterial chromosomes have with eukaryotic chromosomes?
Question
In the formation of nucleosomes,one histone class,H1,is not directly involved,yet it does associate with DNA to form higher level chromosomal structures.Where does this histone H1 associate?
Question
Briefly describe the makeup of VNTRs variable number tandem repeats).
Question
Although mutations have been observed in many different genes,they have not been isolated in histones.Why does this seem reasonable? If one wanted to produce antibodies to histones,would it be an easy task? Explain your answer.
Question
When native chromatin is digested with micrococcal nuclease,what significant result occurs?
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Deck 12: DNA Organization in Chromosomes
1
This figure represents supercoiled,circular,double- stranded DNA: <strong>This figure represents supercoiled,circular,double- stranded DNA:   If this molecule of DNA originated as a linear molecule with a linking number L of 30,which was then circular unwound,the L for the unwound circular molecule would be_________ .</strong> A)28 B)30 C)18 D)20 E)32 If this molecule of DNA originated as a linear molecule with a linking number L of 30,which was then circular unwound,the L for the unwound circular molecule would be_________ .

A)28
B)30
C)18
D)20
E)32
28
2
In which of the following ways do polytene chromosomes differ from other chromosomes?

A)Polytene chromosomes represent uncoiled versions of meiotic chromosomes.
B)Polytene chromosomes are multiple copies of identical single- stranded DNA.
C)Polytene chromosomes can only be found in bacteria.
D)Polytene chromosomes are separated but not replicated.
E)Polytene chromosomes are replicated but not separated.
E
3
Viral chromosomes exist in a variety of conformations and can be made up of _________

A)RNA only
B)DNA only
C)protein- or lipid- coding sequences
D)DNA or RNA
E)DNA,RNA,or protein
DNA or RNA
4
Chromatin of eukaryotes is organized into repeating interactions with protein octamers called nucleosomes.Nucleosomes are composed of which class of molecules?

A)histones
B)H1 histones
C)glycoproteins
D)lipids
E)nonhistone chromosomal proteins
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5
If relaxed circular DNA is designated R ,supercoiled circular DNA is designated S) and linear DNA is designated L ,arrange these conformations in order of increasing rate of sedimentation during centrifugation.

A)L ,S ,R
B)S ,L ,R
C)S ,R ,L
D)R ,S ,L
E)L),R),S)
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6
In human chromosomes,satellite DNA sequences of about 170 base pairs in length are present in tandem arrays of up to 1 million base pairs.Found mainly in centromere regions,these DNA sequences are called .

A)alphoid families
B)telomeres
C)euchromatic regions
D)primers
E)telomere- associated sequences
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Unlock Deck
k this deck
7
The condition that some organisms contain much larger amounts of DNA than are apparently "needed" and that some relatively closely related organisms may have vastly different amounts of DNA is more typical in _________.

A)eukaryotes than in prokaryotes
B)RNA viruses than in DNA viruses
C)the alphoid rather than the diploid family
D)prokaryotes than in eukaryotes
E)viruses than in bacteria
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Unlock for access to all 37 flashcards in this deck.
Unlock Deck
k this deck
8
Eukaryotic chromosomes contain two general domains that relate to the degree of condensation.These two regions are_________ .

A)uniform in the genetic information they contain
B)separated by large stretches of repetitive DNA
C)called heterochromatin and euchromatin
D)void of introns
E)each void of typical protein- coding sequences of DNA
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Unlock Deck
k this deck
9
How was it experimentally determined that "puffs" are transcriptionally active?
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k this deck
10
Chromosomal regions that represent evolutionary vestiges of duplicated copies of genes that have underdone sufficient mutations to render them untranscribable are called_________ .

A)satellites
B)alleles
C)pseudogenes
D)LINEs
E)transposons
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Unlock for access to all 37 flashcards in this deck.
Unlock Deck
k this deck
11
Type I topoisomerases differ from type II topoisomerases in that the type I enzymes_________ .

A)induce negative supercoiling
B)cleave both strands of a double helix
C)cleave one strand of a double helix
D)decrease the linking number L of a double helix
E)ligate fragments of DNA that have been hydrolyzed
Unlock Deck
Unlock for access to all 37 flashcards in this deck.
Unlock Deck
k this deck
12
In E.coli,the genetic material is composed of _________.

A)RNA and protein
B)circular,double- stranded DNA
C)circular,double- stranded RNA
D)polypeptide chains
E)linear,double- stranded DNA
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Unlock Deck
k this deck
13
Describe the chromosomal conformations of ΠX174 and polyomaviruses.
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14
Explain how linear DNA can be supercoiled.
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15
In addition to highly repetitive and unique DNA sequences,a third category of DNA sequences exists.What is it called,and what types of elements are involved in it?

A)multiple gene family DNA; hemoglobin and 5.0S RNA
B)permissive DNA; centromeres and heterochromatin
C)dominant DNA; euchromatin and heterochromatin
D)composite DNA; telomeres and heterochromatin
E)moderately repetitive DNA; SINEs,LINEs,and VNTRs
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k this deck
16
What is the relationship between topoisomers?
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k this deck
17
Which statement about lampbrush chromosomes is incorrect?

A)More DNA is looped out from the axis than is required for a single gene.
B)They are meiotic chromosomes.
C)Looped out regions are active in RNA synthesis.
D)The loops consist of two DNA helices,whereas the axis consists of a single DNA helix.
E)Instead of being condensed,they are extended.
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18
A particular variant of the lambda bacteriophage has a DNA double- stranded genome of 51,365 base pairs.How long would this DNA be?
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19
List several configurations that characterize different viral chromosomes.
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20
The condensed areas in polytene and lampbrush chromosomes are referred to as_________ .

A)centromeres
B)chiasmata
C)chromomeres
D)chromatids
E)puffs
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21
How do VNTRs relate to DNA fingerprinting?
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22
What are histones,and how are they arranged in nucleosomes?
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23
Describe the basic structure of a nucleosome.What is the role of histone H1?
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24
How does a polytene chromosome differ from a typical eukaryotic chromosome?
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25
Approximately how much of the mammalian genome is composed of repetitive DNA?
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26
Compare and contrast the chromosome structure of viruses,bacteria,and eukaryotes.
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27
In instances in the eukaryotic genome,DNA sequences represent evolutionary vestiges of duplicated copies of genes.What are such regions called and what are their characteristics?
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k this deck
28
What is meant by SINE in terms of chromosome structure? By LINE? Why are they called "repetitive"?
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29
What are minisatellites and microsatellites?
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30
Briefly state what is meant by repetitive DNA.
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31
What is unusual about the amino acid composition of histones? How is the function of histones related to the amino acid composition? Of which histones are nucleosomes composed?
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32
List the components of a nucleosome.
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33
What similarities do bacterial chromosomes have with eukaryotic chromosomes?
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34
In the formation of nucleosomes,one histone class,H1,is not directly involved,yet it does associate with DNA to form higher level chromosomal structures.Where does this histone H1 associate?
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35
Briefly describe the makeup of VNTRs variable number tandem repeats).
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36
Although mutations have been observed in many different genes,they have not been isolated in histones.Why does this seem reasonable? If one wanted to produce antibodies to histones,would it be an easy task? Explain your answer.
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37
When native chromatin is digested with micrococcal nuclease,what significant result occurs?
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