Deck 19: Taxonomy, Systematics, and Phylogeny
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Deck 19: Taxonomy, Systematics, and Phylogeny
1
A(n) _______ is one that is present in the common ancestor and all members of a group.
A) shared ancestral character
B) clade
C) divergence
D) shared derived character
E) analogous structure
A) shared ancestral character
B) clade
C) divergence
D) shared derived character
E) analogous structure
A
2
Hair is a character shared by all mammals, but not found in their ancestral lineage. Hair is therefore considered to be a(n)
A) clade.
B) shared ancestral character (trait).
C) shared derived character (trait).
D) analogous structure.
A) clade.
B) shared ancestral character (trait).
C) shared derived character (trait).
D) analogous structure.
C
3
Nonscientists often use the words ''name," ''identify," and ''classify" interchangeably. When they want to know what an organism is, they may ask "Can you name this?" or "Can you identify this?" or "Can you classify this?" Which of the following is/are correct usage(s) of the term(s)?
A) Only the scientist who first describes a new species actually names it.
B) Classifying is grouping, and to classify something requires several organisms so you can group one as closer to a second and distant from a third.
C) A farmer is using a key to detect pest insect species in his fields is identifying insects but not naming or necessarily classifying them.
D) A scientist who publishes the name and description of a new species must necessarily also know both how to identify and classify the species.
E) All of the choices are correct.
A) Only the scientist who first describes a new species actually names it.
B) Classifying is grouping, and to classify something requires several organisms so you can group one as closer to a second and distant from a third.
C) A farmer is using a key to detect pest insect species in his fields is identifying insects but not naming or necessarily classifying them.
D) A scientist who publishes the name and description of a new species must necessarily also know both how to identify and classify the species.
E) All of the choices are correct.
E
4
A study of echinoderm embryos, such as sea stars, confirms a similar developmental pattern to that of vertebrates. In both, the blastopore becomes the anus. This would be considered
A) behavioral data.
B) convergent evolution.
C) analogy.
D) homology.
E) synapomorphy.
A) behavioral data.
B) convergent evolution.
C) analogy.
D) homology.
E) synapomorphy.
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5
Order these major taxonomic categories into an increasingly inclusive hierarchy.
A) genus, species, class, order, family, domain, kingdom, phylum
B) species, genus, family, order, class, phylum, kingdom, domain
C) domain, kingdom, phylum, class, order, family, genus, species
D) class, order, family, genus, species, kingdom, phylum, domain
A) genus, species, class, order, family, domain, kingdom, phylum
B) species, genus, family, order, class, phylum, kingdom, domain
C) domain, kingdom, phylum, class, order, family, genus, species
D) class, order, family, genus, species, kingdom, phylum, domain
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6
Which kingdom or supergroup is characterized by organisms that are heterotrophic by ingestion?
A) Animal
B) Plant
C) Fungi
D) Protists
A) Animal
B) Plant
C) Fungi
D) Protists
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7
If a phylogeny is based on the natural evolution of organisms, it could
A) explain the variations among fossils from rock strata.
B) explain why there are similarities and differences among modern living groups.
C) reflect patterns of shared and unique sections of DNA among groups of animals.
D) help predict where unresearched features will be in common, such as how widely a medicine will be effective among animals.
E) All of the choices are correct.
A) explain the variations among fossils from rock strata.
B) explain why there are similarities and differences among modern living groups.
C) reflect patterns of shared and unique sections of DNA among groups of animals.
D) help predict where unresearched features will be in common, such as how widely a medicine will be effective among animals.
E) All of the choices are correct.
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8
Which of the following features would be used to construct a phylogenic tree?
A) homologous structures
B) fossil record data
C) DNA-DNA hybridization
D) amino acid sequences
E) all of the answer choices are correct
A) homologous structures
B) fossil record data
C) DNA-DNA hybridization
D) amino acid sequences
E) all of the answer choices are correct
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9
Of those listed, which level of classification is the most specific?
A) Kingdom
B) Phylum
C) Family
D) Domain
E) Class
A) Kingdom
B) Phylum
C) Family
D) Domain
E) Class
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10
The scientific name of the giant swallowtail is Heraclides cresphontes. Therefore,
A) it belongs to the genus Heraclides.
B) it belongs to the species cresphontes.
C) the specific epithet is cresphontes.
D) All of the choices are correct.
A) it belongs to the genus Heraclides.
B) it belongs to the species cresphontes.
C) the specific epithet is cresphontes.
D) All of the choices are correct.
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11
The use of a molecular clock may be used to indicate relatedness and evolutionary time
A) if nucleic acid changes are neutral and not tied to adaptation.
B) if nucleic acid changes occur at a fairly constant rate.
C) but still needs to be calibrated with the fossil record.
D) All of the choices are correct.
A) if nucleic acid changes are neutral and not tied to adaptation.
B) if nucleic acid changes occur at a fairly constant rate.
C) but still needs to be calibrated with the fossil record.
D) All of the choices are correct.
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12
The highlighted grouping in the cladogram is a ____________ grouping. 
A) monophyletic
B) paraphyletic
C) polyphyletic
D) None of the answer choices are correct.

A) monophyletic
B) paraphyletic
C) polyphyletic
D) None of the answer choices are correct.
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13
The highlighted grouping in the cladogram is a ____________ grouping. 
A) monophyletic
B) paraphyletic
C) polyphyletic
D) None of the answer choices are correct.

A) monophyletic
B) paraphyletic
C) polyphyletic
D) None of the answer choices are correct.
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14
The amino acid sequences in cytochrome c were determined for chickens, ducks, and humans. Scientists found a difference of 3 amino acids between chickens and ducks, but between chickens and humans there were 13 differences. One may conclude that
A) chickens are as closely related to humans as they are to ducks.
B) chickens are more closely related to ducks than they are to humans.
C) chickens are more closely related to humans than they are to ducks.
D) None of the above.
A) chickens are as closely related to humans as they are to ducks.
B) chickens are more closely related to ducks than they are to humans.
C) chickens are more closely related to humans than they are to ducks.
D) None of the above.
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15
Of the three domains in Woese's classification system, which do most biologists recognize?
A) Monera, Archae, and Bacteria
B) Fungi, Monera, and Archae
C) Archae, Bacteria and Eukarya
D) Protista, Fungi, and Eukarya
A) Monera, Archae, and Bacteria
B) Fungi, Monera, and Archae
C) Archae, Bacteria and Eukarya
D) Protista, Fungi, and Eukarya
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16
In cladistics, _______________ is(are) the primary criterion used to classify organisms.
A) ecological niche
B) common ancestry
C) mating behavior
D) observable traits
E) All of the answer choices are correct.
A) ecological niche
B) common ancestry
C) mating behavior
D) observable traits
E) All of the answer choices are correct.
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17
Whittaker's classification included Kingdom Monera, which included all prokaryotes. Why is this classification obsolete?
A) Based on fossil evidence, this group has been divided into three newly named kingdoms.
B) This kingdom now includes more organisms, so the name has been changed.
C) The prokaryotes, which were included in this kingdom, are now included in Protista.
D) Based on molecular data, Monera has been divided into the two distinct domains, Archaea and Bacteria.
A) Based on fossil evidence, this group has been divided into three newly named kingdoms.
B) This kingdom now includes more organisms, so the name has been changed.
C) The prokaryotes, which were included in this kingdom, are now included in Protista.
D) Based on molecular data, Monera has been divided into the two distinct domains, Archaea and Bacteria.
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18
______ is the process of naming and assigning organisms to a taxon.
A) Cladistics
B) Taxonomy
C) Phylogeny
D) Classification
E) None of the answer choices are correct.
A) Cladistics
B) Taxonomy
C) Phylogeny
D) Classification
E) None of the answer choices are correct.
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19
The highlighted grouping in the cladogram is a ____________ grouping. 
A) monophyletic
B) paraphyletic
C) polyphyletic
D) None of the answer choices are correct.

A) monophyletic
B) paraphyletic
C) polyphyletic
D) None of the answer choices are correct.
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20
The northern copperhead is Agkistrodon contortrix contortrix, the southern copperhead is Agkistrodon contortrix mokasen, and the cottonmouth is Agkistrodon piscivorous. Therefore,
A) all are subspecies of Agkistrodon.
B) they are three distinct species.
C) the copperheads are subspecies and the cottonmouth is a separate species.
D) they are all the same species.
A) all are subspecies of Agkistrodon.
B) they are three distinct species.
C) the copperheads are subspecies and the cottonmouth is a separate species.
D) they are all the same species.
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21
If you were using cladistics to construct a phylogenetic tree of birds, what is the best outgroup?
A) eagles
B) robins
C) bats
D) eastern bluebirds
A) eagles
B) robins
C) bats
D) eastern bluebirds
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22
Based on this tree, mammals are as closely related to birds as they are to snakes. 

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23
Which of the following statements about taxonomy is NOT true?
A) In cladistics, a common ancestor and all its descendents that share one or more derived traits are placed in a single clade.
B) Analogous structures are derived from a common ancestral structure to perform the same function.
C) Biochemical data and the fossil record can be used independently to indicate the length of time since two species diverged from a common ancestor.
D) Homologous structures are derived from a single structure in the ancestor, although they may be adapted to different uses in the descendent species (e.g., a dog's foreleg and a human's arm).
A) In cladistics, a common ancestor and all its descendents that share one or more derived traits are placed in a single clade.
B) Analogous structures are derived from a common ancestral structure to perform the same function.
C) Biochemical data and the fossil record can be used independently to indicate the length of time since two species diverged from a common ancestor.
D) Homologous structures are derived from a single structure in the ancestor, although they may be adapted to different uses in the descendent species (e.g., a dog's foreleg and a human's arm).
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24
Phylogenetic trees with proportional branch lengths
A) indicate relatedness among organisms.
B) indicate the relative number of nucleotide pair differences between groups.
C) are constructed by comparing DNA sequences of homologous genes and calibrating this molecular clock with the fossil record.
D) All of the answer choices are true.
E) indicate relatedness evolutionary time.
A) indicate relatedness among organisms.
B) indicate the relative number of nucleotide pair differences between groups.
C) are constructed by comparing DNA sequences of homologous genes and calibrating this molecular clock with the fossil record.
D) All of the answer choices are true.
E) indicate relatedness evolutionary time.
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25
A recent book by a reputable biologist suggests there is a deep, hot biosphere under the Earth's crust that may have more biomass than all life at the Earth's surface. This would primarily rely on what organisms?
A) primitive animals
B) primitive heat-loving plants
C) fungi living on the detritus from above
D) thermoacidophilic archaea
E) viruses
A) primitive animals
B) primitive heat-loving plants
C) fungi living on the detritus from above
D) thermoacidophilic archaea
E) viruses
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26
Based on this tree, the lineage leading to ________ was the first to diverge from the other lines. 
A) turtles
B) birds
C) dinosaurs
D) mammals
E) crocodilians

A) turtles
B) birds
C) dinosaurs
D) mammals
E) crocodilians
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27
Which kingdom is correctly described?
A) Plantae: multicellular and photoautotrophic
B) Fungi: multicellular and heterotrophic by ingestion
C) Animalia: multicellular and heterotrophic by absorption
D) Protista: unicellular and heterotrophic only
A) Plantae: multicellular and photoautotrophic
B) Fungi: multicellular and heterotrophic by ingestion
C) Animalia: multicellular and heterotrophic by absorption
D) Protista: unicellular and heterotrophic only
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28
Single celled eukaryotic cells belong to which of the following domains?
A) Eukarya
B) Fungi
C) Animalia
D) Plantae
A) Eukarya
B) Fungi
C) Animalia
D) Plantae
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29
If there are so many million insects and so few scientists to describe them, perhaps we could just assign the insects numbers and descriptions, rather than names. Describe why this would not accomplish the same "job" as giving them a scientific name, and provide two potential items of knowledge that would be missing with just a number and description. Simply, what does naming an organism also accomplish?
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30
All of the following are true regarding systematics EXCEPT that it
A) is the study of the diversity of organisms at all levels of organization.
B) is the specific study of identification, naming, and classification of organisms.
C) relies on data from the fossil record, homology, and molecular data.
D) utilizes protein, DNA, and RNA comparisons to determine relatedness of individuals.
A) is the study of the diversity of organisms at all levels of organization.
B) is the specific study of identification, naming, and classification of organisms.
C) relies on data from the fossil record, homology, and molecular data.
D) utilizes protein, DNA, and RNA comparisons to determine relatedness of individuals.
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31
The evolution of organisms in the three domains and four kingdoms is most accurately described by which sequence?
A) Prokaryotes to Protists to Plants, from Plants separately to both Animals and Fungi
B) Prokaryotes to Fungi to Protists to Plants to Animals
C) Prokaryotes to Protists, from Protists separately to Fungi, Plants, and Animals
D) Protists to Prokaryotes to Fungi, from Fungi separately to Plants and Animals
E) Prokaryotes to Protists, separately to Animals and Plants with Fungi a loss of plant photosynthesis
A) Prokaryotes to Protists to Plants, from Plants separately to both Animals and Fungi
B) Prokaryotes to Fungi to Protists to Plants to Animals
C) Prokaryotes to Protists, from Protists separately to Fungi, Plants, and Animals
D) Protists to Prokaryotes to Fungi, from Fungi separately to Plants and Animals
E) Prokaryotes to Protists, separately to Animals and Plants with Fungi a loss of plant photosynthesis
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32
The outlined group is 
A) monophyletic.
B) paraphyletic.
C) polyphyletic.
D) monophyletic and paraphyletic are correct.

A) monophyletic.
B) paraphyletic.
C) polyphyletic.
D) monophyletic and paraphyletic are correct.
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33
Which of the following best represents analogous structures?
A) the arm of a human and the wing of a bat
B) the arm of a human and the leg of a human
C) the wing of a butterfly and the wing of a bee
D) the wing of a bat and the wing of a butterfly
A) the arm of a human and the wing of a bat
B) the arm of a human and the leg of a human
C) the wing of a butterfly and the wing of a bee
D) the wing of a bat and the wing of a butterfly
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34
When comparing archaea with bacteria
A) both archaea and bacteria are easily cultured and studied in the laboratory.
B) the chemical nature of the cell wall of archaea and bacteria is identical and shows their early relationship.
C) bacteria are not very diverse and are limited in distribution, while archaea are far more diverse and found everywhere.
D) the archaea and bacteria are cases of reduction in traits and are both derived from early eukarya.
E) None of the choices are true.
A) both archaea and bacteria are easily cultured and studied in the laboratory.
B) the chemical nature of the cell wall of archaea and bacteria is identical and shows their early relationship.
C) bacteria are not very diverse and are limited in distribution, while archaea are far more diverse and found everywhere.
D) the archaea and bacteria are cases of reduction in traits and are both derived from early eukarya.
E) None of the choices are true.
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35
When ectoparasites first arrive and adapt to the fur or feathery habitat of a host, they often lose more complex ancestral features. So it is possible to gain a trait in evolution and subsequently lose it. However, it is considered vastly improbable that this same trait will again re-evolve. Therefore, in trying to trace evolutionary lineages, can we always expect the most primitive forms to be the simplest and the most advanced to be the most complex? Why or why not?
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36
Early biologists referred to animals as ''simple" and ''advanced," but now it is more accurate to use the following terms:
A) ''allopatric" and ''sympatric," since the species is most important.
B) "generalists" and ''specialists," since this is how biologists classify characters.
C) ''simple" and ''complex," since anatomy terms are more exact.
D) ''evolved" and ''un-evolved," since everything ties together with evolution.
E) ''primitive" and ''derived," since some early forms became very complex and some evolved forms are derived from them but lost characters and are simple.
A) ''allopatric" and ''sympatric," since the species is most important.
B) "generalists" and ''specialists," since this is how biologists classify characters.
C) ''simple" and ''complex," since anatomy terms are more exact.
D) ''evolved" and ''un-evolved," since everything ties together with evolution.
E) ''primitive" and ''derived," since some early forms became very complex and some evolved forms are derived from them but lost characters and are simple.
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37
Which of the following Domains include the majority of the organisms that were previously classified in Kingdom Monera?
A) Bacteria and Eubacteria
B) Protista and Eukarya
C) Archaea and Algae
D) Eukarya and Bacteria
E) Archaea and Bacteria
A) Bacteria and Eubacteria
B) Protista and Eukarya
C) Archaea and Algae
D) Eukarya and Bacteria
E) Archaea and Bacteria
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38
Eels are as closely related to lizards as they are to snakes. 

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39
The famous Greek philosopher Aristotle could be thought of as a taxonomist since he identified and grouped organisms.
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40
Taxonomy
A) is the branch of biology dealing with the naming, identification, and classification of organisms.
B) uses a binomial system developed by Linnaeus.
C) uses reproductive isolation as the basis of definition of a species.
D) All of the choices are correct.
A) is the branch of biology dealing with the naming, identification, and classification of organisms.
B) uses a binomial system developed by Linnaeus.
C) uses reproductive isolation as the basis of definition of a species.
D) All of the choices are correct.
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41
Which of the following groups represent the current Domains of life?
A) Bacteria, Eukarya, Archaea
B) Bacteria, Eukarya, Monera
C) Bacteria, Eukarya, Archae
D) Eubacteria, Animalia, Archaea
A) Bacteria, Eukarya, Archaea
B) Bacteria, Eukarya, Monera
C) Bacteria, Eukarya, Archae
D) Eubacteria, Animalia, Archaea
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42
The scientific name of the family dog is Canis familiaris. Canis represents the species _______.
A) genus name.
B) species name.
C) phylum name.
D) kingdom.
A) genus name.
B) species name.
C) phylum name.
D) kingdom.
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43
DNA or protein can be used as a ''molecular clock" that tells how long it has been since two species have diverged from a common ancestor.
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44
Which Domains did Kingdom Monera get divided into?
A) Archaea and Bacteria
B) Protista and Archaea
C) Bacteria and Eukarya
D) Archaea and Eukarya
A) Archaea and Bacteria
B) Protista and Archaea
C) Bacteria and Eukarya
D) Archaea and Eukarya
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45
What is the correct order of the Linnaean system of classification, starting with the most general category?
A) Domain, Kingdom, Phylum, Class
B) Domain, Phylum, Class, Kingdom
C) Kingdom, Class, Phylum, Species
D) Genus, Order, Class, Phylum,
A) Domain, Kingdom, Phylum, Class
B) Domain, Phylum, Class, Kingdom
C) Kingdom, Class, Phylum, Species
D) Genus, Order, Class, Phylum,
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46
New data about rRNA led to the three domain system of classification.
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47
The principle of parsimony states that a cladogram produces the best hypothesis about relationships of organisms when the maximum number of assumptions are considered.
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48
Which of the following lists of features exemplifies the Domain Archaea?
A) Unicellular, varying brached lipids in their cell membrane, no nuclear envelope and contain some introns
B) Multicellular, varying branched lipids in their cell membrane, no nuclear envelope and contain some introns
C) Unicellular, unbranched phospholipids in their cell membrane, no nuclear envelope and contain some introns
D) Unicellular, varying brached lipids in their cell membrane, nuclear envelope and contain some introns
A) Unicellular, varying brached lipids in their cell membrane, no nuclear envelope and contain some introns
B) Multicellular, varying branched lipids in their cell membrane, no nuclear envelope and contain some introns
C) Unicellular, unbranched phospholipids in their cell membrane, no nuclear envelope and contain some introns
D) Unicellular, varying brached lipids in their cell membrane, nuclear envelope and contain some introns
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49
Create a list of the features used to describe members of Domain Eukarya.
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50
Cladists feel that a cladogram is a hypothesis about the evolutionary history of a group. Using what you have learned about scientific hypotheses, support this view of a cladogram.
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51
Which type of trait is more valuable in determining the evolutionary relationship between two organisms?
A) derived
B) ancestral
C) Both traits are equally valuable in determining the evolutionary relationship between two organisms.
D) Neither trait is useful in determining the evolutionary relationship between two organisms.
A) derived
B) ancestral
C) Both traits are equally valuable in determining the evolutionary relationship between two organisms.
D) Neither trait is useful in determining the evolutionary relationship between two organisms.
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52
A taxon is the general name for a group of organisms that exhibit a set of shared traits.
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53
Which of the following list best describes the features used to classify an organism as a member of Domain Bacteria?
A) Unicellular, lacking a nuclear envelope and membrane bound organelles, contains ribosomes but lacks introns
B) Unicellular, contains a nuclear envelope and membrane bound organelles, contains ribosomes but lacks introns
C) Unicellular, lacks a nuclear envelope and membrane bound organelles, contains introns but lacks ribosomes
D) Multicellular, lacks a nuclear envelope and membrane bound organelles, contains introns but lacks ribosomes
A) Unicellular, lacking a nuclear envelope and membrane bound organelles, contains ribosomes but lacks introns
B) Unicellular, contains a nuclear envelope and membrane bound organelles, contains ribosomes but lacks introns
C) Unicellular, lacks a nuclear envelope and membrane bound organelles, contains introns but lacks ribosomes
D) Multicellular, lacks a nuclear envelope and membrane bound organelles, contains introns but lacks ribosomes
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54
DNA barcoding is a guaranteed method of determining an organisms taxonomic group. -142013
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55
Domain Archaea is the only domain in which the organisms lack membrane bound organelles.
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56
Convergent evolution has occurred when distantly related species have a structure that looks the same only because of adaptation to the same type of environment.
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