Exam 13: Dna Replication and Repair

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The DNA polymerases is a relatively large family of polymerases in which each member is specialized for incorporating nucleotides opposite particular types of DNA lesions in the template strand engage in a type of DNA synthesis called __________. They have an unusually spacious active site that ____________.

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What supplies the energy that drives the relief of mechanical strain by DNA gyrase?

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Cultured mammalian cells grown in thymidine for many generations were allowed to undergo replication in the presence of bromodeoxyuridine (BrdU), which replaces thymidine in DNA. After two rounds of replication, what does the DNA look like?

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What is the probability that, in E. coli, an incorrect nucleotide will be incorporated into DNA during replication and remain there?

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What is responsible for joining eukaryotic Okazaki fragments together?

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How can the replication of both DNA strands by two tethered polymerases be accomplished when the template strands run in opposite directions?

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What is the advantage of transcription-coupled repair?

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Patients with the classical form of xeroderma pigmentosum have a defect in one of the genes involved in ______________.

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_________ are DNA unwinding enzymes that unwind the DNA in a reaction using the energy from ________ to move along one of the DNA strands, breaking the _______ holding the two strands together.

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Which eukaryotic DNA polymerase is thought to be the primary DNA-synthesizing enzyme during replication of the lagging strand?

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What is responsible for filling the gap left by the nucleases that digest the primer and the short DNA segment added to it by polymerase δ?

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What is the name of the noncatalytic component of the DNA polymerase III holoenzyme that keeps the polymerase associated with the DNA template?

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Why did Kornberg initially think that the exonuclease activity he found in his DNA polymerase preparations was a contaminating enzyme?

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Which type of DNA repair removes, via a cut-and-patch mechanism, a variety of bulky lesions, like pyrimidine dimers and nucleotides to which various chemical groups have been attached?

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What binds to the ORC to assemble the prereplication complex (pre-RC)that is competent to initiate replication?

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Why is an intact, linear double helix an ineffective template for DNA polymerase?

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What is the mechanism of action of the anti-HIV drug AZT?

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Bacteria are grown in a medium containing [15N]H4Cl for a number of generations so that all of the DNA is made of fully 'heavy' DNA. The bacteria are moved to a new medium and grown in [14N]H4Cl so that all subsequent new DNA will be 'light.' If replication were dispersive, what would the DNA look like after two generation times?

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Which of the following is an advantage of using RNA primers during initiation of a strand in replication?

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Who was the first to suggest semiconservative replication?

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